3D RNA Modeling Workshop Clark Center Room S361 Friday, June 19, 2009
| 9:00am – 9:15am | Welcome and introduction of instructors and workshop attendees - Russ Altman |
9:15am – 10:15am | Introduction to 3D RNA modeling and molecular dynamics – Russ Altman |
10:15am – 10:30am | BREAK
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10:30am – 12:00pm | RNABuilder: introduction & hands-on demo – Samuel Flores |
12:00pm – 1:00pm
| Lunch (on your own)
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1:00pm—2:30pm | Nucleic Acid Simulation Toolkit (NAST): introduction & hands-on demo – Magdalena Jonikas |
2:30pm – 2:45pm | BREAK
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2:45pm – 4:00pm | OpenMM Zephyr: introduction & hands-on demo – Christopher Bruns |
4:00pm – 4:50pm | Apply new tools to your own molecule – You, with assistance from the instructors |
4:50pm – 5:00pm | Wrap up – All |
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